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tbx15 T-box transcription factor 15 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110156200, updated on 15-Mar-2024

Summary

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Gene symbol
tbx15
Gene description
T-box transcription factor 15
Locus tag
NL108_002391
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026570970.1 (22887705..22910047, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018353850.1 (888160..909845, complement)

NW_026570970.1Genomic Context describing neighboring genes Neighboring gene ganglioside induced differentiation associated protein 2 Neighboring gene zona pellucida-like domain-containing protein 1 Neighboring gene tryptophanyl tRNA synthetase 2, mitochondrial Neighboring gene hydroxyacid oxidase 2 (long chain)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-box transcription factor TBX15
Names
T-box 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026570970.1 Reference ASM2622593v1 Primary Assembly

    Range
    22887705..22910047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020920400.2 → XP_020776059.1  T-box transcription factor TBX15

    Conserved Domains (1) summary
    cd00182
    Location:106 → 301
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...
Nucleotide Protein
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Gene LinkOut

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