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nop53 NOP53 ribosome biogenesis factor [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110153589, updated on 15-Mar-2024

Summary

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Gene symbol
nop53
Gene description
NOP53 ribosome biogenesis factor
Locus tag
NL108_004802
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571541.1 (8526773..8536173)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018349964.1 (1482167..1492037, complement)

NW_026571541.1Genomic Context describing neighboring genes Neighboring gene histone H3.3A Neighboring gene histone H3.3A Neighboring gene gap junction delta-2 protein Neighboring gene distal membrane arm assembly component 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5S rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome biogenesis protein NOP53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571541.1 Reference ASM2622593v1 Primary Assembly

    Range
    8526773..8536173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020917497.2 → XP_020773156.1  ribosome biogenesis protein NOP53

    Conserved Domains (1) summary
    pfam07767
    Location:48 → 429
    Nop53; Nop53 (60S ribosomal biogenesis)
Nucleotide Protein
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