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TPBGL trophoblast glycoprotein like [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110150592, updated on 15-Mar-2024

Summary

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Gene symbol
TPBGL
Gene description
trophoblast glycoprotein like
See related
EnsemblRapid:ENSOVIG00010004817
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018336854.1 (787998..790870)

NW_018336854.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 2AT4-like Neighboring gene solute carrier organic anion transporter family member 2B1 Neighboring gene arrestin beta 1 Neighboring gene uncharacterized LOC110150591

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018336854 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trophoblast glycoprotein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018336854.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    787998..790870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020913608.1 → XP_020769267.1  trophoblast glycoprotein-like

    UniProtKB/TrEMBL
    A0A6J0Z6Z2
    Related
    ENSOVIP00010006684.1, ENSOVIT00010007559.1
    Conserved Domains (4) summary
    sd00031
    Location:234 → 245
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:103 → 126
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:101 → 158
    LRR_8; Leucine rich repeat
    cl15307
    Location:241 → 278
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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