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EGLN2 egl-9 family hypoxia inducible factor 2 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110144035, updated on 15-Mar-2024

Summary

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Gene symbol
EGLN2
Gene description
egl-9 family hypoxia inducible factor 2
See related
EnsemblRapid:ENSOVIG00010020935
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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See EGLN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018335565.1 (1379054..1388253)

NW_018335565.1Genomic Context describing neighboring genes Neighboring gene MIA SH3 domain containing Neighboring gene RAB4B, member RAS oncogene family Neighboring gene cytochrome P450 2F3-like Neighboring gene cytochrome P450 2F3 Neighboring gene carbonyl reductase family member 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018335565 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
egl nine homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018335565.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    1379054..1388253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020903857.1 → XP_020759516.1  egl nine homolog 2

    UniProtKB/TrEMBL
    A0A6J0YEL8
    Conserved Domains (1) summary
    smart00702
    Location:191 → 367
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_020903856.1 → XP_020759515.1  egl nine homolog 2

    UniProtKB/TrEMBL
    A0A6J0YEL8
    Related
    ENSOVIP00010029617.1, ENSOVIT00010033542.1
    Conserved Domains (1) summary
    smart00702
    Location:191 → 367
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

RNA

  1. XR_002315781.1 RNA Sequence

  2. XR_002315782.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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