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LOXL3 lysyl oxidase like 3 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110138528, updated on 15-Mar-2024

Summary

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Gene symbol
LOXL3
Gene description
lysyl oxidase like 3
See related
EnsemblRapid:ENSOVIG00010002438
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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See LOXL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018327496.1 (182657..200553)

NW_018327496.1Genomic Context describing neighboring genes Neighboring gene meiosis 1 associated protein Neighboring gene docking protein 1 Neighboring gene HtrA serine peptidase 2 Neighboring gene AUP1 lipid droplet regulating VLDL assembly factor Neighboring gene DEAQ-box RNA dependent ATPase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018327496 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-lysine 6-oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-lysine oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysyl oxidase homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018327496.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    182657..200553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020895638.1 → XP_020751297.1  lysyl oxidase homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J0XNK4
    Related
    ENSOVIP00010003412.1, ENSOVIT00010003843.1
    Conserved Domains (2) summary
    smart00202
    Location:306 → 406
    SR; Scavenger receptor Cys-rich
    pfam01186
    Location:529 → 727
    Lysyl_oxidase; Lysyl oxidase

  2. XM_020895654.1 → XP_020751313.1  lysyl oxidase homolog 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0XN83
    Conserved Domains (2) summary
    smart00202
    Location:101 → 201
    SR; Scavenger receptor Cys-rich
    pfam01186
    Location:324 → 522
    Lysyl_oxidase; Lysyl oxidase

  3. XM_020895647.1 → XP_020751306.1  lysyl oxidase homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J0XQL9
    Conserved Domains (2) summary
    smart00202
    Location:56 → 164
    SR; Scavenger receptor Cys-rich
    pfam01186
    Location:169 → 367
    Lysyl_oxidase; Lysyl oxidase
Nucleotide Protein
Heading Accession and Version

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