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CFAP70 cilia and flagella associated protein 70 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110138137, updated on 15-Mar-2024

Summary

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Gene symbol
CFAP70
Gene description
cilia and flagella associated protein 70
See related
EnsemblRapid:ENSOVIG00010001542
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018327484.1 (1852414..1932993, complement)

NW_018327484.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 149 member B1 Neighboring gene uncharacterized LOC110138230 Neighboring gene DnaJ heat shock protein family (Hsp40) member C9 Neighboring gene ADP-sugar pyrophosphatase pseudogene Neighboring gene mitochondrial ribosomal protein S16 Neighboring gene annexin A7 Neighboring gene MSS51 mitochondrial translational activator

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018327484 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cilia- and flagella-associated protein 70

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018327484.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    1852414..1932993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020894935.1 → XP_020750594.1  cilia- and flagella-associated protein 70 isoform X2

    UniProtKB/TrEMBL
    A0A6J0XR68
    Conserved Domains (2) summary
    COG0457
    Location:910 → 1110
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:670 → 697
    TPR; TPR repeat [structural motif]

  2. XM_020894946.1 → XP_020750605.1  cilia- and flagella-associated protein 70 isoform X3

    UniProtKB/TrEMBL
    A0A6J0XM48
    Conserved Domains (2) summary
    sd00006
    Location:673 → 698
    TPR; TPR repeat [structural motif]
    cl26002
    Location:666 → 1064
    TPR_11; TPR repeat

  3. XM_020894915.1 → XP_020750574.1  cilia- and flagella-associated protein 70 isoform X1

    UniProtKB/TrEMBL
    A0A6J0XR49
    Related
    ENSOVIP00010002092.1, ENSOVIT00010002377.1
    Conserved Domains (2) summary
    COG0457
    Location:911 → 1111
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:671 → 698
    TPR; TPR repeat [structural motif]

  4. XM_020894925.1 → XP_020750584.1  cilia- and flagella-associated protein 70 isoform X1

    UniProtKB/TrEMBL
    A0A6J0XR49
    Conserved Domains (2) summary
    COG0457
    Location:911 → 1111
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:671 → 698
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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