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MTREX Mtr4 exosome RNA helicase [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110136992, updated on 15-Mar-2024

Summary

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Gene symbol
MTREX
Gene description
Mtr4 exosome RNA helicase
See related
EnsemblRapid:ENSOVIG00010012535
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Also known as
SKIV2L2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018333751.1 (239995..330071, complement)

NW_018333751.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110136990 Neighboring gene uncharacterized LOC110136986 Neighboring gene phospholipid phosphatase 1 Neighboring gene DExH-box helicase 29 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene cyclin O

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018333751 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of 5.8S rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
superkiller viralicidic activity 2-like 2
Names
Ski2 like RNA helicase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018333751.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    239995..330071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020893134.1 → XP_020748793.1  superkiller viralicidic activity 2-like 2

    UniProtKB/TrEMBL
    A0A6J0XG34
    Related
    ENSOVIP00010017665.1, ENSOVIT00010019962.1
    Conserved Domains (1) summary
    COG4581
    Location:68 → 1042
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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