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PUS7L pseudouridine synthase 7 like [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110132081, updated on 15-Mar-2024

Summary

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Gene symbol
PUS7L
Gene description
pseudouridine synthase 7 like
See related
EnsemblRapid:ENSOVIG00010014089
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018343331.1 (350360..371433, complement)

NW_018343331.1Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor associated kinase 4 Neighboring gene twinfilin actin binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018343331 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pseudouridylate synthase 7 homolog-like protein
Names
pseudouridylate synthase 7 like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018343331.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    350360..371433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020885219.1 → XP_020740878.1  pseudouridylate synthase 7 homolog-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6J0WSR0
    Related
    ENSOVIP00010019905.1, ENSOVIT00010022496.1
    Conserved Domains (2) summary
    cd02576
    Location:299 → 698
    PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
    cl00130
    Location:22 → 47
    PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)

  2. XM_020885220.1 → XP_020740879.1  pseudouridylate synthase 7 homolog-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6J0WSR0
    Conserved Domains (2) summary
    cd02576
    Location:299 → 698
    PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
    cl00130
    Location:22 → 47
    PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)

  3. XM_020885218.1 → XP_020740877.1  pseudouridylate synthase 7 homolog-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6J0WSR0
    Conserved Domains (2) summary
    cd02576
    Location:299 → 698
    PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
    cl00130
    Location:22 → 47
    PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)

  4. XM_020885221.1 → XP_020740880.1  pseudouridylate synthase 7 homolog-like protein isoform X2

    UniProtKB/TrEMBL
    A0A6J0WW65
    Conserved Domains (1) summary
    cd02576
    Location:1 → 384
    PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
Nucleotide Protein
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