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MKRN3 makorin ring finger protein 3 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110130880, updated on 15-Mar-2024

Summary

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Gene symbol
MKRN3
Gene description
makorin ring finger protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018342586.1 (558224..560862)

NW_018342586.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2 subunit 3 pseudogene Neighboring gene zinc finger protein 484 Neighboring gene MAGE family member L2 Neighboring gene necdin, MAGE family member

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018342586 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase makorin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018342586.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    558224..560862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020883154.1 → XP_020738813.1  probable E3 ubiquitin-protein ligase makorin-3

    UniProtKB/TrEMBL
    A0A6J0WMC4
    Conserved Domains (4) summary
    smart00356
    Location:77 → 103
    ZnF_C3H1; zinc finger
    pfam15815
    Location:411 → 459
    MKRN1_C; E3 ubiquitin-protein ligase makorin-1, C-terminal
    cl17238
    Location:290 → 350
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl27165
    Location:234 → 382
    PHA02929; N1R/p28-like protein; Provisional
Nucleotide Protein
Heading Accession and Version

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