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CAGE1 cancer antigen 1 [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110122211, updated on 15-Mar-2024

Summary

Gene symbol
CAGE1
Gene description
cancer antigen 1
See related
EnsemblRapid:ENSOVIG00010010147
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018337709.1 (239216..273438, complement)

NW_018337709.1Genomic Context describing neighboring genes Neighboring gene ras responsive element binding protein 1 Neighboring gene signal sequence receptor subunit 1 Neighboring gene RIO kinase 1 Neighboring gene transfer RNA threonine (anticodon GGU)

Genomic regions, transcripts, and products

Genomic Sequence:
NW_018337709 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

General protein information

Preferred Names
cancer-associated gene 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018337709.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    239216..273438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020869638.1XP_020725297.1  cancer-associated gene 1 protein isoform X5

    UniProtKB/TrEMBL
    A0A6J0VII7
    Conserved Domains (2) summary
    pfam15066
    Location:4450
    CAGE1; Cancer-associated gene protein 1 family
    cl25732
    Location:313633
    SMC_N; RecF/RecN/SMC N terminal domain
  2. XM_020869636.1XP_020725295.1  cancer-associated gene 1 protein isoform X4

    UniProtKB/TrEMBL
    A0A6J0VM74
    Conserved Domains (2) summary
    pfam15066
    Location:4450
    CAGE1; Cancer-associated gene protein 1 family
    cl25732
    Location:313641
    SMC_N; RecF/RecN/SMC N terminal domain
  3. XM_020869635.1XP_020725294.1  cancer-associated gene 1 protein isoform X3

    UniProtKB/TrEMBL
    A0A6J0VP35
    Conserved Domains (2) summary
    pfam15066
    Location:4450
    CAGE1; Cancer-associated gene protein 1 family
    cl25732
    Location:242720
    SMC_N; RecF/RecN/SMC N terminal domain
  4. XM_020869634.1XP_020725293.1  cancer-associated gene 1 protein isoform X2

    UniProtKB/TrEMBL
    A0A6J0VJT3
    Related
    ENSOVIP00010014231.1, ENSOVIT00010016079.1
    Conserved Domains (2) summary
    pfam15066
    Location:4450
    CAGE1; Cancer-associated gene protein 1 family
    cl25732
    Location:242735
    SMC_N; RecF/RecN/SMC N terminal domain
  5. XM_020869633.1XP_020725292.1  cancer-associated gene 1 protein isoform X1

    UniProtKB/TrEMBL
    A0A6J0VII1
    Conserved Domains (2) summary
    pfam15066
    Location:4450
    CAGE1; Cancer-associated gene protein 1 family
    cl25732
    Location:242740
    SMC_N; RecF/RecN/SMC N terminal domain

RNA

  1. XR_002309150.1 RNA Sequence

  2. XR_002309151.1 RNA Sequence

  3. XR_002309149.1 RNA Sequence

  4. XR_002309147.1 RNA Sequence

  5. XR_002309144.1 RNA Sequence

  6. XR_002309145.1 RNA Sequence

  7. XR_002309148.1 RNA Sequence

  8. XR_002309146.1 RNA Sequence