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LOC109998750 junction mediating and regulatory protein, p53 cofactor [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109998750, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109998750
Gene description
junction mediating and regulatory protein, p53 cofactor
See related
Ensembl:ENSLBEG00000015191
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
jmy
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114922.1 (239284..258298, complement)

NW_018114922.1Genomic Context describing neighboring genes Neighboring gene cardiomyopathy associated 5 Neighboring gene terminal nucleotidyltransferase 2 Neighboring gene homer scaffold protein 1b Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene betaine--homocysteine S-methyltransferase 1-like Neighboring gene betaine--homocysteine S-methyltransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018114922 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Arp2/3 complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' actin filament nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intrinsic apoptotic signaling pathway by p53 class mediator IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junction-mediating and -regulatory protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114922.1 Reference BallGen_V1

    Range
    239284..258298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020653621.1 → XP_020509277.1  junction-mediating and -regulatory protein

    UniProtKB/TrEMBL
    A0A3Q3MHT3
    Related
    ENSLBEP00000019790.1, ENSLBET00000020861.1
    Conserved Domains (2) summary
    pfam15871
    Location:164 → 516
    JMY; Junction-mediating and -regulatory protein
    pfam15920
    Location:5 → 54
    WHAMM-JMY_N; N-terminal of Junction-mediating and WASP homolog-associated
Nucleotide Protein
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