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znhit3 zinc finger, HIT-type containing 3 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109996006, updated on 14-Mar-2024

Summary

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Gene symbol
znhit3
Gene description
zinc finger, HIT-type containing 3
See related
Ensembl:ENSLBEG00000016539
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114763.1 (471229..473479, complement)

NW_018114763.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class W Neighboring gene myosin XIX Neighboring gene nuclear protein 2-like Neighboring gene vitamin K epoxide reductase complex, subunit 1-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018114763 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box C/D snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snoRNA localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of pre-snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger HIT domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114763.1 Reference BallGen_V1

    Range
    471229..473479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020649938.2 → XP_020505594.1  zinc finger HIT domain-containing protein 3

    UniProtKB/TrEMBL
    A0A3Q3FP28
    Related
    ENSLBEP00000021517.1, ENSLBET00000022670.1
    Conserved Domains (1) summary
    pfam04438
    Location:1 → 30
    zf-HIT; HIT zinc finger
Nucleotide Protein
Heading Accession and Version

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