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ubap2l ubiquitin associated protein 2-like [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109995004, updated on 14-Mar-2024

Summary

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Gene symbol
ubap2l
Gene description
ubiquitin associated protein 2-like
See related
Ensembl:ENSLBEG00000026186
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114727.1 (357060..382926, complement)

NW_018114727.1Genomic Context describing neighboring genes Neighboring gene aquaporin 10b Neighboring gene HCLS1 associated protein X-1 Neighboring gene chromosome unknown C1orf43 homolog Neighboring gene tuftelin 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018114727 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-associated protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114727.1 Reference BallGen_V1

    Range
    357060..382926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020648561.2 → XP_020504217.1  ubiquitin-associated protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A3Q3NJK6
    Conserved Domains (2) summary
    cd14277
    Location:52 → 89
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:554 → 581
    DUF3697; Ubiquitin-associated protein 2

  2. XM_020648566.2 → XP_020504222.1  ubiquitin-associated protein 2-like isoform X6

    Conserved Domains (2) summary
    cd14277
    Location:52 → 89
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:539 → 566
    DUF3697; Ubiquitin-associated protein 2

  3. XM_020648564.2 → XP_020504220.1  ubiquitin-associated protein 2-like isoform X4

    UniProtKB/TrEMBL
    A0A3Q3GWR6
    Related
    ENSLBEP00000034913.1, ENSLBET00000036402.1
    Conserved Domains (2) summary
    cd14277
    Location:52 → 89
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:539 → 566
    DUF3697; Ubiquitin-associated protein 2

  4. XM_020648563.2 → XP_020504219.1  ubiquitin-associated protein 2-like isoform X3

    Conserved Domains (2) summary
    cd14277
    Location:52 → 89
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:554 → 581
    DUF3697; Ubiquitin-associated protein 2

  5. XM_020648562.2 → XP_020504218.1  ubiquitin-associated protein 2-like isoform X2

    Conserved Domains (2) summary
    cd14277
    Location:52 → 89
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:554 → 581
    DUF3697; Ubiquitin-associated protein 2

  6. XM_020648565.2 → XP_020504221.1  ubiquitin-associated protein 2-like isoform X5

    UniProtKB/TrEMBL
    A0A3Q3GNL9
    Related
    ENSLBEP00000034956.1, ENSLBET00000036446.1
    Conserved Domains (2) summary
    cd14277
    Location:52 → 89
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:554 → 581
    DUF3697; Ubiquitin-associated protein 2

  7. XM_020648560.2 → XP_020504216.1  ubiquitin-associated protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A3Q3NJK6
    Related
    ENSLBEP00000034870.1, ENSLBET00000036357.1
    Conserved Domains (2) summary
    cd14277
    Location:52 → 89
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:554 → 581
    DUF3697; Ubiquitin-associated protein 2
Nucleotide Protein
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