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l3mbtl2 L3MBTL histone methyl-lysine binding protein 2 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109992292, updated on 14-Mar-2024

Summary

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Gene symbol
l3mbtl2
Gene description
L3MBTL histone methyl-lysine binding protein 2
See related
Ensembl:ENSLBEG00000002456
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114640.1 (701188..712752, complement)

NW_018114640.1Genomic Context describing neighboring genes Neighboring gene Ran GTPase activating protein 1b Neighboring gene chondroadherin-like b Neighboring gene E1A binding protein p300 a Neighboring gene chromobox homolog 7b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018114640 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lethal(3)malignant brain tumor-like protein 2
Names
L3MBTL2, polycomb repressive complex 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114640.1 Reference BallGen_V1

    Range
    701188..712752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020644840.2 → XP_020500496.1  lethal(3)malignant brain tumor-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3EAR6
    Related
    ENSLBEP00000003141.1, ENSLBET00000003308.1
    Conserved Domains (3) summary
    smart00561
    Location:550 → 643
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam02820
    Location:472 → 539
    MBT; mbt repeat
    pfam05485
    Location:5 → 82
    THAP; THAP domain

  2. XM_029279512.1 → XP_029135345.1  lethal(3)malignant brain tumor-like protein 2 isoform X2

    Conserved Domains (2) summary
    smart00561
    Location:386 → 479
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam02820
    Location:308 → 376
    MBT; mbt repeat
Nucleotide Protein
Heading Accession and Version

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