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zfpm1 zinc finger protein, FOG family member 1 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109990577, updated on 14-Mar-2024

Summary

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Gene symbol
zfpm1
Gene description
zinc finger protein, FOG family member 1
See related
Ensembl:ENSLBEG00000007278
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114421.1 (3534796..3637311, complement)

NW_018114421.1Genomic Context describing neighboring genes Neighboring gene ubiquitin carboxyl-terminal hydrolase 47-like Neighboring gene type-2 ice-structuring protein-like Neighboring gene KIAA0513 ortholog Neighboring gene carboxylesterase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018114421 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II-specific DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in erythrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in megakaryocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZFPM1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114421.1 Reference BallGen_V1

    Range
    3534796..3637311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020642751.2 → XP_020498407.1  zinc finger protein ZFPM1

    UniProtKB/TrEMBL
    A0A3Q3EPM8
    Related
    ENSLBEP00000009378.1, ENSLBET00000009898.1
    Conserved Domains (2) summary
    sd00017
    Location:329 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:340 → 365
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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