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eya4 EYA transcriptional coactivator and phosphatase 4 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109987669, updated on 14-Mar-2024

Summary

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Gene symbol
eya4
Gene description
EYA transcriptional coactivator and phosphatase 4
See related
Ensembl:ENSLBEG00000002488
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114536.1 (792421..836299, complement)

NW_018114536.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD100 Neighboring gene small nucleolar RNA SNORD100 Neighboring gene ribosomal protein S12 Neighboring gene transcription factor 21 Neighboring gene TBP-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018114536 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eyes absent homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114536.1 Reference BallGen_V1

    Range
    792421..836299 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020638830.2 → XP_020494486.1  eyes absent homolog 4 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3E7G1
    Conserved Domains (2) summary
    cd02601
    Location:343 → 614
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
    cl28087
    Location:139 → 315
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  2. XM_020638828.2 → XP_020494484.1  eyes absent homolog 4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3E7G1
    Conserved Domains (2) summary
    cd02601
    Location:371 → 642
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
    cl28087
    Location:167 → 343
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  3. XM_020638831.2 → XP_020494487.1  eyes absent homolog 4 isoform X3

    UniProtKB/TrEMBL
    A0A3Q3E7G1
    Related
    ENSLBEP00000003227.1, ENSLBET00000003398.1
    Conserved Domains (2) summary
    cd02601
    Location:342 → 613
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
    cl28087
    Location:138 → 314
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

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