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kctd1 potassium channel tetramerization domain containing 1 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109985171, updated on 21-Dec-2023

Summary

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Gene symbol
kctd1
Gene description
potassium channel tetramerization domain containing 1
See related
Ensembl:ENSLBEG00000018323
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114419.1 (3478404..3490748)

NW_018114419.1Genomic Context describing neighboring genes Neighboring gene cadherin 2, type 1, N-cadherin (neuronal) Neighboring gene uncharacterized LOC114920436 Neighboring gene aquaporin 4 Neighboring gene proteasome 20S subunit alpha 8 Neighboring gene SS18 subunit of BAF chromatin remodeling complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018114419 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain-containing protein KCTD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114419.1 Reference BallGen_V1

    Range
    3478404..3490748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020635468.2 → XP_020491124.1  BTB/POZ domain-containing protein KCTD1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3FYL9
    Related
    ENSLBEP00000023898.1, ENSLBET00000025142.1
    Conserved Domains (1) summary
    cl02518
    Location:40 → 132
    BTB; BTB/POZ domain

  2. XM_020635460.2 → XP_020491116.1  BTB/POZ domain-containing protein KCTD1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3FTM1
    Related
    ENSLBEP00000023906.1, ENSLBET00000025150.1
    Conserved Domains (1) summary
    cl02518
    Location:117 → 209
    BTB; BTB/POZ domain
Nucleotide Protein
Heading Accession and Version

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