U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

afap1l1a actin filament associated protein 1-like 1a [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109981078, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
afap1l1a
Gene description
actin filament associated protein 1-like 1a
See related
Ensembl:ENSLBEG00000013290
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Also known as
afap1l1
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114442.1 (196308..210062)

NW_018114442.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114920132 Neighboring gene actin binding LIM protein family, member 3 Neighboring gene gamma-aminobutyric acid type A receptor subunit pi Neighboring gene forkhead box I3b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018114442 Unplaced Scaffold Reference BallGen_V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
actin filament-associated protein 1-like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Labrus bergylta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BallGen_V1

Genomic

  1. NW_018114442.1 Reference BallGen_V1

    Range
    196308..210062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020629720.2 → XP_020485376.2  actin filament-associated protein 1-like 1

    UniProtKB/TrEMBL
    A0A3Q3FDH4, A0A3Q3FDK5
    Related
    ENSLBEP00000017292.1, ENSLBET00000018263.1
    Conserved Domains (3) summary
    cd13307
    Location:418 → 517
    PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    pfam15898
    Location:635 → 699
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    cl17171
    Location:229 → 335
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.