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zmp:0000000896 caspase recruitment domain family member 10 [ Monopterus albus (swamp eel) ]

Gene ID: 109974649, updated on 14-Mar-2024

Summary

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Gene symbol
zmp:0000000896
Gene description
caspase recruitment domain family member 10
See related
Ensembl:ENSMALG00000001094
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Also known as
card10
Orthologs
zebrafish all
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Genomic context

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See zmp:0000000896 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018128222.1 (16026..34843)

NW_018128222.1Genomic Context describing neighboring genes Neighboring gene CDC42 effector protein (Rho GTPase binding) 1b Neighboring gene uncharacterized LOC109974650 Neighboring gene trinucleotide repeat-containing gene 6B protein-like Neighboring gene casein kinase I

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018128222.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase recruitment domain-containing protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018128222.1 Reference M_albus_1.0 Primary Assembly

    Range
    16026..34843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020624966.1 → XP_020480622.1  caspase recruitment domain-containing protein 10

    UniProtKB/TrEMBL
    A0A3Q3IM68
    Related
    ENSMALP00000001471.1, ENSMALT00000001520.1
    Conserved Domains (5) summary
    cd00992
    Location:606 → 653
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl14633
    Location:30 → 115
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl17036
    Location:712 → 777
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:909 → 951
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
    cl25732
    Location:139 → 443
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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