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bckdhb branched chain keto acid dehydrogenase E1 subunit beta [ Monopterus albus (swamp eel) ]

Gene ID: 109972616, updated on 11-Apr-2024

Summary

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Gene symbol
bckdhb
Gene description
branched chain keto acid dehydrogenase E1 subunit beta
See related
Ensembl:ENSMALG00000013893
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018128142.1 (491767..551660, complement)

NW_018128142.1Genomic Context describing neighboring genes Neighboring gene inhibitor of Bruton agammaglobulinemia tyrosine kinase Neighboring gene terminal nucleotidyltransferase 5Aa

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018128142.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018128142.1 Reference M_albus_1.0 Primary Assembly

    Range
    491767..551660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020621598.1 → XP_020477254.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q3JXE1
    Conserved Domains (1) summary
    PTZ00182
    Location:1 → 320
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional

  2. XM_020621597.1 → XP_020477253.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q3JJH5, A0A3Q3JXE1
    Related
    ENSMALP00000019918.1, ENSMALT00000020309.1
    Conserved Domains (1) summary
    PTZ00182
    Location:62 → 391
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional

  3. XM_020621596.1 → XP_020477252.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q3JJH5, A0A3Q3JXE1
    Conserved Domains (1) summary
    PTZ00182
    Location:62 → 391
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
Nucleotide Protein
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