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cdc42se1 CDC42 small effector 1 [ Monopterus albus (swamp eel) ]

Gene ID: 109972562, updated on 14-Mar-2024

Summary

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Gene symbol
cdc42se1
Gene description
CDC42 small effector 1
See related
Ensembl:ENSMALG00000012424
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018128140.1 (1491556..1512895)

NW_018128140.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109972540 Neighboring gene uncharacterized LOC109972573 Neighboring gene bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein Neighboring gene carnitine O-palmitoyltransferase 1, liver isoform-like Neighboring gene uncharacterized LOC109972556 Neighboring gene MINDY lysine 48 deubiquitinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018128140.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CDC42 small effector protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018128140.1 Reference M_albus_1.0 Primary Assembly

    Range
    1491556..1512895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020621518.1 → XP_020477174.1  CDC42 small effector protein 1

    UniProtKB/TrEMBL
    A0A3Q3JER4
    Related
    ENSMALP00000017798.1, ENSMALT00000018147.1
    Conserved Domains (1) summary
    cd00132
    Location:59 → 98
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

  2. XM_020621519.1 → XP_020477175.1  CDC42 small effector protein 1

    UniProtKB/TrEMBL
    A0A3Q3JER4
    Conserved Domains (1) summary
    cd00132
    Location:59 → 98
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
Nucleotide Protein
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