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nsmce1 NSE1 homolog, SMC5-SMC6 complex component [ Monopterus albus (swamp eel) ]

Gene ID: 109970712, updated on 14-Mar-2024

Summary

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Gene symbol
nsmce1
Gene description
NSE1 homolog, SMC5-SMC6 complex component
See related
Ensembl:ENSMALG00000008121
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018128085.1 (312780..318212, complement)

NW_018128085.1Genomic Context describing neighboring genes Neighboring gene calcyon neuron-specific vesicular protein Neighboring gene trace amine-associated receptor 13c-like Neighboring gene VPS37A subunit of ESCRT-I Neighboring gene mitochondrial calcium uptake family, member 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018128085.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postreplication repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-structural maintenance of chromosomes element 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018128085.1 Reference M_albus_1.0 Primary Assembly

    Range
    312780..318212 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020618464.1 → XP_020474120.1  non-structural maintenance of chromosomes element 1 homolog

    UniProtKB/TrEMBL
    A0A3Q3IZS3
    Related
    ENSMALP00000011423.1, ENSMALT00000011668.1
    Conserved Domains (2) summary
    pfam07574
    Location:10 → 169
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex
    cd16493
    Location:185 → 230
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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