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hexb hexosaminidase B (beta polypeptide) [ Monopterus albus (swamp eel) ]

Gene ID: 109967774, updated on 14-Mar-2024

Summary

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Gene symbol
hexb
Gene description
hexosaminidase B (beta polypeptide)
See related
Ensembl:ENSMALG00000010247
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018128015.1 (708112..715165)

NW_018128015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109967801 Neighboring gene deoxyribonuclease 1 like 4, tandem duplicate 1 Neighboring gene tripartite motif-containing protein 35-like Neighboring gene GTP dependent ribosome recycling factor mitochondrial 2 Neighboring gene NSA2 ribosome biogenesis homolog (S. cerevisiae)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018128015.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase subunit beta
Names
hexosaminidase subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018128015.1 Reference M_albus_1.0 Primary Assembly

    Range
    708112..715165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020613585.1 → XP_020469241.1  beta-hexosaminidase subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A3Q3J7R3
    Related
    ENSMALP00000014639.1, ENSMALT00000014945.1
    Conserved Domains (2) summary
    cd06562
    Location:186 → 526
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:40 → 164
    Glycohydro_20b2; beta-acetyl hexosaminidase like

  2. XM_020613587.1 → XP_020469243.1  beta-hexosaminidase subunit beta isoform X3

    Conserved Domains (2) summary
    cd06562
    Location:186 → 458
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:40 → 164
    Glycohydro_20b2; beta-acetyl hexosaminidase like

  3. XM_020613584.1 → XP_020469240.1  beta-hexosaminidase subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A3Q3QKD2
    Related
    ENSMALP00000014616.1, ENSMALT00000014923.1
    Conserved Domains (2) summary
    cd06562
    Location:186 → 529
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:40 → 164
    Glycohydro_20b2; beta-acetyl hexosaminidase like
Nucleotide Protein
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