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sytl1 synaptotagmin-like 1 [ Monopterus albus (swamp eel) ]

Gene ID: 109963924, updated on 14-Mar-2024

Summary

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Gene symbol
sytl1
Gene description
synaptotagmin-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
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Genomic context

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See sytl1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127962.1 (1367954..1377771)

NW_018127962.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 3 Neighboring gene CD164 sialomucin-like 2 Neighboring gene EF-hand calcium binding domain 1 Neighboring gene RNA binding motif protein 48 Neighboring gene peroxisomal biogenesis factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127962.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in exocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127962.1 Reference M_albus_1.0 Primary Assembly

    Range
    1367954..1377771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020606856.1 → XP_020462512.1  synaptotagmin-like protein 1

    UniProtKB/TrEMBL
    A0A3Q3K692
    Conserved Domains (3) summary
    cd04020
    Location:370 → 526
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cl14603
    Location:242 → 357
    C2; C2 domain
    cl22851
    Location:23 → 51
    PHD_SF; PHD finger superfamily
Nucleotide Protein
Heading Accession and Version

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