U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

seh1l SEH1-like (S. cerevisiae) [ Monopterus albus (swamp eel) ]

Gene ID: 109963867, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
seh1l
Gene description
SEH1-like (S. cerevisiae)
See related
Ensembl:ENSMALG00000013356
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127961.1 (1197015..1206148)

NW_018127961.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 76 Neighboring gene protein tyrosine phosphatase non-receptor type 2a Neighboring gene centrosomal protein 192 Neighboring gene low density lipoprotein receptor class A domain containing 4 Neighboring gene melanocortin receptor 5-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018127961.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Seh1-associated complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nucleoporin SEH1
Names
SEH1 like nucleoporin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127961.1 Reference M_albus_1.0 Primary Assembly

    Range
    1197015..1206148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020606767.1 → XP_020462423.1  nucleoporin SEH1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3QSF4
    Conserved Domains (2) summary
    sd00039
    Location:15 → 55
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:11 → 305
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_020606769.1 → XP_020462425.1  nucleoporin SEH1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q3QSF4
    Related
    ENSMALP00000019126.1, ENSMALT00000019509.1
    Conserved Domains (2) summary
    sd00039
    Location:15 → 55
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:11 → 305
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_020606768.1 → XP_020462424.1  nucleoporin SEH1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3QSF4
    Conserved Domains (2) summary
    sd00039
    Location:15 → 55
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:11 → 305
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.