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rnf145 ring finger protein 145 [ Monopterus albus (swamp eel) ]

Gene ID: 109959999, updated on 9-Nov-2023

Summary

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Gene symbol
rnf145
Gene description
ring finger protein 145
See related
Ensembl:ENSMALG00000019902
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
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Genomic context

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See rnf145 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127922.1 (2165295..2178442)

NW_018127922.1Genomic Context describing neighboring genes Neighboring gene interleukin 12B, b Neighboring gene ubiquitin-like domain containing CTD phosphatase 1 Neighboring gene transcription factor COE1-like Neighboring gene stanniocalcin-2-like Neighboring gene HIV-1 Tat specific factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127922.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 145

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127922.1 Reference M_albus_1.0 Primary Assembly

    Range
    2165295..2178442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020599803.1 → XP_020455459.1  RING finger protein 145 isoform X1

    Conserved Domains (3) summary
    pfam13705
    Location:8 → 506
    TRC8_N; TRC8 N-terminal domain
    cl17238
    Location:533 → 575
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl26329
    Location:520 → 646
    zf-rbx1; RING-H2 zinc finger domain

  2. XM_020599805.1 → XP_020455461.1  RING finger protein 145 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3KHJ1
    Related
    ENSMALP00000028773.1, ENSMALT00000029294.1
    Conserved Domains (3) summary
    pfam13705
    Location:8 → 506
    TRC8_N; TRC8 N-terminal domain
    cl17238
    Location:533 → 575
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl26329
    Location:520 → 608
    zf-rbx1; RING-H2 zinc finger domain

  3. XM_020599804.1 → XP_020455460.1  RING finger protein 145 isoform X1

    Conserved Domains (3) summary
    pfam13705
    Location:8 → 506
    TRC8_N; TRC8 N-terminal domain
    cl17238
    Location:533 → 575
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl26329
    Location:520 → 646
    zf-rbx1; RING-H2 zinc finger domain
Nucleotide Protein
Heading Accession and Version

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