U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

bco2a beta-carotene oxygenase 2a [ Monopterus albus (swamp eel) ]

Gene ID: 109959541, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
bco2a
Gene description
beta-carotene oxygenase 2a
See related
Ensembl:ENSMALG00000017652
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Also known as
bco2
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See bco2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127919.1 (1521938..1532559)

NW_018127919.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 15a Neighboring gene uncharacterized LOC109959542 Neighboring gene uncharacterized LOC109959531 Neighboring gene uncharacterized LOC109959530 Neighboring gene ubiquitin associated and SH3 domain containing Ba

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018127919.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta,beta-carotene 9',10'-oxygenase
Names
beta-carotene oxygenase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127919.1 Reference M_albus_1.0 Primary Assembly

    Range
    1521938..1532559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020598993.1 → XP_020454649.1  beta,beta-carotene 9',10'-oxygenase isoform X1

    UniProtKB/TrEMBL
    A0A3Q3JYK8
    Related
    ENSMALP00000025394.1, ENSMALT00000025868.1
    Conserved Domains (1) summary
    pfam03055
    Location:33 → 539
    RPE65; Retinal pigment epithelial membrane protein

  2. XM_020598994.1 → XP_020454650.1  beta,beta-carotene 9',10'-oxygenase isoform X2

    Conserved Domains (1) summary
    pfam03055
    Location:33 → 542
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.