U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rrp9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [ Monopterus albus (swamp eel) ]

Gene ID: 109958956, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
rrp9
Gene description
ribosomal RNA processing 9, U3 small nucleolar RNA binding protein
See related
Ensembl:ENSMALG00000000378
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rrp9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127916.1 (746674..751850)

NW_018127916.1Genomic Context describing neighboring genes Neighboring gene probable G-protein coupled receptor Neighboring gene caveolin 4a Neighboring gene uncharacterized LOC109958955 Neighboring gene uncharacterized LOC109958957 Neighboring gene glutamate receptor, metabotropic 2b Neighboring gene testis-expressed protein 264-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018127916.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
U3 small nucleolar RNA-interacting protein 2
Names
ribosomal RNA processing 9, small subunit (SSU) processome component, homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127916.1 Reference M_albus_1.0 Primary Assembly

    Range
    746674..751850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020597956.1 → XP_020453612.1  U3 small nucleolar RNA-interacting protein 2

    UniProtKB/TrEMBL
    A0A3Q3IJS1
    Related
    ENSMALP00000000486.1, ENSMALT00000000521.1
    Conserved Domains (2) summary
    cd00200
    Location:139 → 444
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:150 → 198
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.