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slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [ Rhincodon typus (whale shark) ]

Gene ID: 109937898, updated on 14-Mar-2024

Summary

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Gene symbol
slx4
Gene description
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
See related
EnsemblRapid:ENSRTYG00015019015
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
15
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 21 NC_063352.1 (37153692..37179598)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018080197.1 (27077..52399, complement)

Chromosome 21 - NC_063352.1Genomic Context describing neighboring genes Neighboring gene presequence translocase associated motor 16 Neighboring gene calpain 15 Neighboring gene amidohydrolase domain containing 2 Neighboring gene serine/threonine-protein kinase 19 Neighboring gene ras homolog family member T2 Neighboring gene decapping exoribonuclease

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic DNA double-strand break processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in resolution of meiotic recombination intermediates IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Slx1-Slx4 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
structure-specific endonuclease subunit SLX4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063352.1 Reference sRhiTyp1.1

    Range
    37153692..37179598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020536398.2 → XP_020391987.2  structure-specific endonuclease subunit SLX4

    Related
    ENSRTYP00015029837.1, ENSRTYT00015033124.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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