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LOC109936901 beta-2-microglobulin [ Rhincodon typus (whale shark) ]

Gene ID: 109936901, updated on 30-Nov-2023

Summary

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Gene symbol
LOC109936901
Gene description
beta-2-microglobulin
See related
EnsemblRapid:ENSRTYG00015013084
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
b2m
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Genomic context

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See LOC109936901 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
6
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 35 NC_063366.1 (5682808..5693725, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018077674.1 (47594..51636)

Chromosome 35 - NC_063366.1Genomic Context describing neighboring genes Neighboring gene bromodomain-containing protein 2 Neighboring gene small nucleolar RNA SNORD10 Neighboring gene uncharacterized LOC125487032 Neighboring gene zinc finger protein OZF-like Neighboring gene zinc finger protein 271-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC class II protein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of exogenous peptide antigen via MHC class II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immunoglobulin production involved in immunoglobulin-mediated immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide antigen assembly with MHC class II protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MHC class II protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-2-microglobulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063366.1 Reference sRhiTyp1.1

    Range
    5682808..5693725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048616925.1 → XP_048472882.1  beta-2-microglobulin

  2. XM_048616924.1 → XP_048472881.1  beta-2-microglobulin

    Related
    ENSRTYP00015020302.1, ENSRTYT00015022551.1
Nucleotide Protein
Heading Accession and Version

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