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smad3b SMAD family member 3b [ Rhincodon typus (whale shark) ]

Gene ID: 109936169, updated on 14-Mar-2024

Summary

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Gene symbol
smad3b
Gene description
SMAD family member 3b
See related
EnsemblRapid:ENSRTYG00015016261
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
smad3
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 33
Exon count:
7
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 33 NC_063364.1 (29655646..29686184, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018075829.1 (21720..114476)

Chromosome 33 - NC_063364.1Genomic Context describing neighboring genes Neighboring gene IQ domain-containing protein H-like Neighboring gene alpha and gamma adaptin binding protein Neighboring gene SMAD family member 6b Neighboring gene uncharacterized LOC125486770

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables I-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heteromeric SMAD protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mothers against decapentaplegic homolog 3b
Names
SMAD family member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063364.1 Reference sRhiTyp1.1

    Range
    29655646..29686184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048616126.1 → XP_048472083.1  mothers against decapentaplegic homolog 3b

    Related
    ENSRTYP00015025486.1, ENSRTYT00015028258.1
Nucleotide Protein
Heading Accession and Version

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