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abat 4-aminobutyrate aminotransferase [ Rhincodon typus (whale shark) ]

Gene ID: 109927093, updated on 14-Mar-2024

Summary

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Gene symbol
abat
Gene description
4-aminobutyrate aminotransferase
See related
EnsemblRapid:ENSRTYG00015018928
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
16
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 21 NC_063352.1 (32563523..32729629)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018056139.1 (15347..61385)

Chromosome 21 - NC_063352.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 114 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 186 Neighboring gene phosphomannomutase 2 Neighboring gene calcium regulated heat stable protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-aminobutyrate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063352.1 Reference sRhiTyp1.1

    Range
    32563523..32729629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048609726.1 → XP_048465683.1  4-aminobutyrate aminotransferase, mitochondrial

    Related
    ENSRTYP00015029749.1, ENSRTYT00015033007.1
Nucleotide Protein
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Gene LinkOut

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