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chmp4ba charged multivesicular body protein 4Ba [ Rhincodon typus (whale shark) ]

Gene ID: 109921574, updated on 14-Mar-2024

Summary

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Gene symbol
chmp4ba
Gene description
charged multivesicular body protein 4Ba
See related
EnsemblRapid:ENSRTYG00015021632
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
chmp4b
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 19 NC_063350.1 (6133000..6172592, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018042619.1 (27208..68511)

Chromosome 19 - NC_063350.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2, subunit 2 beta Neighboring gene RALY heterogeneous nuclear ribonucleoprotein Neighboring gene zinc finger protein 341-like Neighboring gene arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle budding from membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 4b
Names
charged multivesicular body protein 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063350.1 Reference sRhiTyp1.1

    Range
    6133000..6172592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020521596.2 → XP_020377185.1  charged multivesicular body protein 4b

    Related
    ENSRTYP00015034062.1, ENSRTYT00015037757.1
    Conserved Domains (1) summary
    pfam03357
    Location:22 → 195
    Snf7
Nucleotide Protein
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