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slit2 slit homolog 2 (Drosophila) [ Rhincodon typus (whale shark) ]

Gene ID: 109920161, updated on 14-Mar-2024

Summary

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Gene symbol
slit2
Gene description
slit homolog 2 (Drosophila)
See related
EnsemblRapid:ENSRTYG00015017416
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
37
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 1 NC_063332.1 (96897562..97323618, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018028136.1 (1886..427221, complement)

Chromosome 1 - NC_063332.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel interacting protein 4a Neighboring gene parkin coregulated like Neighboring gene tyrosine-protein phosphatase non-receptor type 3-like Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Roundabout binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell growth IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal ganglion cell axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
slit homolog 2 protein
Names
slit guidance ligand 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063332.1 Reference sRhiTyp1.1

    Range
    96897562..97323618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048602443.1 → XP_048458400.1  slit homolog 2 protein

    Related
    ENSRTYP00015027331.1, ENSRTYT00015030366.1
Nucleotide Protein
Heading Accession and Version

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