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LOC109913987 scinderin [ Rhincodon typus (whale shark) ]

Gene ID: 109913987, updated on 30-Nov-2023

Summary

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Gene symbol
LOC109913987
Gene description
scinderin
See related
EnsemblRapid:ENSRTYG00015020061
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
scin
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 2 NC_063333.1 (87922930..87983034)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018033126.1 (58482..180816)

Chromosome 2 - NC_063333.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125487007 Neighboring gene scinderin-like Neighboring gene uncharacterized LOC125486370 Neighboring gene uncharacterized LOC125486372 Neighboring gene zinc finger protein 385D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament severing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scinderin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063333.1 Reference sRhiTyp1.1

    Range
    87922930..87983034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020513552.2 → XP_020369141.2  scinderin

    Related
    ENSRTYP00015031550.1, ENSRTYT00015034994.1
Nucleotide Protein
Heading Accession and Version

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