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LOC109913409 nuclear receptor subfamily 1, group d, member 1 [ Rhincodon typus (whale shark) ]

Gene ID: 109913409, updated on 30-Nov-2023

Summary

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Gene symbol
LOC109913409
Gene description
nuclear receptor subfamily 1, group d, member 1
See related
EnsemblRapid:ENSRTYG00015008494
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
nr1d1
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Genomic context

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See LOC109913409 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
8
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 30 NC_063361.1 (27185944..27244037)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018032479.1 (132252..156244)

Chromosome 30 - NC_063361.1Genomic Context describing neighboring genes Neighboring gene casc3 exon junction complex subunit Neighboring gene MSL complex subunit 1a Neighboring gene thyroid hormone receptor alpha Neighboring gene cell division cycle 6 homolog (S. cerevisiae)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 1 group D member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063361.1 Reference sRhiTyp1.1

    Range
    27185944..27244037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048614418.1 → XP_048470375.1  nuclear receptor subfamily 1 group D member 1

    Related
    ENSRTYP00015013279.1, ENSRTYT00015014533.1
Nucleotide Protein
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