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ptgr2 prostaglandin reductase 2 [ Rhincodon typus (whale shark) ]

Gene ID: 109910520, updated on 14-Mar-2024

Summary

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Gene symbol
ptgr2
Gene description
prostaglandin reductase 2
See related
EnsemblRapid:ENSRTYG00015020322
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 8 NC_063339.1 (79889012..79925344)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018029732.1 (128411..164835)

Chromosome 8 - NC_063339.1Genomic Context describing neighboring genes Neighboring gene dynein, axonemal, light chain 1 Neighboring gene mitotic deacetylase associated SANT domain protein b Neighboring gene U2 spliceosomal RNA Neighboring gene transmembrane protein 62 Neighboring gene ubiquitin protein ligase E3 component n-recognin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 15-oxoprostaglandin 13-oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin reductase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063339.1 Reference sRhiTyp1.1

    Range
    79889012..79925344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048599630.1 → XP_048455587.1  prostaglandin reductase 2 isoform X2

  2. XM_048599633.1 → XP_048455590.1  prostaglandin reductase 2 isoform X4

  3. XM_048599637.1 → XP_048455594.1  prostaglandin reductase 2 isoform X5

  4. XM_048599629.1 → XP_048455586.1  prostaglandin reductase 2 isoform X1

    Related
    ENSRTYP00015031951.1, ENSRTYT00015035415.1

  5. XM_048599632.1 → XP_048455589.1  prostaglandin reductase 2 isoform X3

    Related
    ENSRTYP00015031952.1, ENSRTYT00015035416.1

  6. XM_048599631.1 → XP_048455588.1  prostaglandin reductase 2 isoform X2

  7. XM_048599634.1 → XP_048455591.1  prostaglandin reductase 2 isoform X4

  8. XM_048599636.1 → XP_048455593.1  prostaglandin reductase 2 isoform X4

Nucleotide Protein
Heading Accession and Version

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