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sirt4 sirtuin 4 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109893606, updated on 14-Mar-2024

Summary

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Gene symbol
sirt4
Gene description
sirtuin 4
See related
Ensembl:ENSOKIG00005027482
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG1
Exon count:
4
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG1 NC_034174.2 (41880674..41890233, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG1 NC_034174.1 (31159412..31166931)

Linkage Group LG1 - NC_034174.2Genomic Context describing neighboring genes Neighboring gene ubiquinol-cytochrome-c reductase complex assembly factor 2 Neighboring gene translocator protein Neighboring gene translocase of outer mitochondrial membrane 6 homolog (yeast) Neighboring gene saxiphilin Neighboring gene uncharacterized LOC109893577 Neighboring gene eukaryotic translation initiation factor 4E transporter

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD-dependent protein deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAD-dependent protein lipoamidase sirtuin-4, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034174.2 Reference Okis_V2 Primary Assembly

    Range
    41880674..41890233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020486870.2 → XP_020342459.1  NAD-dependent protein lipoamidase sirtuin-4, mitochondrial

    UniProtKB/TrEMBL
    A0A8C7HVP6
    Related
    ENSOKIP00005064070.1, ENSOKIT00005068097.1
    Conserved Domains (1) summary
    cd01409
    Location:45 → 306
    SIRT4; Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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