U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

las1l LAS1 like ribosome biogenesis factor [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109892594, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
las1l
Gene description
LAS1 like ribosome biogenesis factor
See related
Ensembl:ENSOKIG00005050112
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See las1l in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
15
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG6 NC_034179.2 (27635540..27641357)
100 previous assembly Okis_V1 (GCF_002021735.1) LG6 NC_034179.1 (20850876..20856604)

Linkage Group LG6 - NC_034179.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116374372 Neighboring gene moesin Neighboring gene zinc finger CCCH-type containing 12B Neighboring gene shisa family member 2a

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of 5.8S rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Las1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ribosomal biogenesis protein LAS1L

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034179.2 Reference Okis_V2 Primary Assembly

    Range
    27635540..27641357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020485246.2 → XP_020340835.1  ribosomal biogenesis protein LAS1L isoform X1

    UniProtKB/TrEMBL
    A0A8C7LM21
    Conserved Domains (1) summary
    pfam04031
    Location:13 → 157
    Las1; Las1-like

  2. XM_031826521.1 → XP_031682381.1  ribosomal biogenesis protein LAS1L isoform X2

    Conserved Domains (1) summary
    pfam04031
    Location:13 → 157
    Las1; Las1-like

  3. XM_020485245.2 → XP_020340834.1  ribosomal biogenesis protein LAS1L isoform X1

    UniProtKB/TrEMBL
    A0A8C7LM21
    Related
    ENSOKIP00005115570.1, ENSOKIT00005123628.1
    Conserved Domains (1) summary
    pfam04031
    Location:13 → 157
    Las1; Las1-like

  4. XM_020485247.2 → XP_020340836.1  ribosomal biogenesis protein LAS1L isoform X2

    Conserved Domains (1) summary
    pfam04031
    Location:13 → 157
    Las1; Las1-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.