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LOC109876592 rogdi atypical leucine zipper [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109876592, updated on 14-Dec-2023

Summary

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Gene symbol
LOC109876592
Gene description
rogdi atypical leucine zipper
See related
Ensembl:ENSOKIG00005024976
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
rogdi
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Okis_V2 (GCF_002021735.2) Unplaced Scaffold NW_022261983.1 (14119322..14132772)
100 previous assembly Okis_V1 (GCF_002021735.1) Unplaced Scaffold NW_018087190.1 (5064..17687, complement)

NW_022261983.1Genomic Context describing neighboring genes Neighboring gene periplakin-like Neighboring gene putative oxidoreductase GLYR1 Neighboring gene small integral membrane protein 22-like Neighboring gene conserved oligomeric Golgi complex subunit 1-like Neighboring gene regulator of G-protein signaling 9-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of RAVE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein rogdi homolog
Names
rogdi homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NW_022261983.1 Reference Okis_V2 Primary Assembly

    Range
    14119322..14132772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031814134.1 → XP_031669994.1  protein rogdi homolog

    UniProtKB/TrEMBL
    A0A8C7HPM7, A0A8C7HWB3
    Related
    ENSOKIP00005058292.1, ENSOKIT00005061962.1
    Conserved Domains (1) summary
    pfam10259
    Location:28 → 286
    Rogdi_lz; Rogdi leucine zipper containing protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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