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hspb7 heat shock protein family, member 7 (cardiovascular) [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109869603, updated on 14-Mar-2024

Summary

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Gene symbol
hspb7
Gene description
heat shock protein family, member 7 (cardiovascular)
See related
Ensembl:ENSOKIG00005028001
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG24
Exon count:
4
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG24 NC_034197.2 (20666504..20670198, complement)
100 previous assembly Okis_V1 (GCF_002021735.1) LG24 NC_034197.1 (19369165..19372078)

Linkage Group LG24 - NC_034197.2Genomic Context describing neighboring genes Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) Neighboring gene zinc finger and BTB domain containing 17 Neighboring gene chloride channel K Neighboring gene family with sequence similarity 131 member C Neighboring gene eph receptor A2 b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock protein beta-7
Names
heat shock protein family B (small) member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034197.2 Reference Okis_V2 Primary Assembly

    Range
    20666504..20670198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020459842.2 → XP_020315431.1  heat shock protein beta-7 isoform X2

    Conserved Domains (1) summary
    cd06479
    Location:33 → 113
    ACD_HspB7_like; Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect ...

  2. XM_020459841.2 → XP_020315430.1  heat shock protein beta-7 isoform X1

    UniProtKB/TrEMBL
    A0A8C7I3H5
    Related
    ENSOKIP00005065218.1, ENSOKIT00005069331.1
    Conserved Domains (1) summary
    cd06479
    Location:62 → 142
    ACD_HspB7_like; Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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