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cdk5rap3 CDK5 regulatory subunit associated protein 3 [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109865870, updated on 14-Mar-2024

Summary

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Gene symbol
cdk5rap3
Gene description
CDK5 regulatory subunit associated protein 3
See related
Ensembl:ENSOKIG00005012472
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG20
Exon count:
14
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG20 NC_034193.2 (19408182..19412913)
100 previous assembly Okis_V1 (GCF_002021735.1) LG20 NC_034193.1 (15184254..15188968)

Linkage Group LG20 - NC_034193.2Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L10 Neighboring gene pyridoxamine 5'-phosphate oxidase Neighboring gene proline rich 15 like b Neighboring gene uncharacterized LOC109866011 Neighboring gene nfe2 like bZIP transcription factor 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CDK5 regulatory subunit-associated protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034193.2 Reference Okis_V2 Primary Assembly

    Range
    19408182..19412913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020454359.2 → XP_020309948.1  CDK5 regulatory subunit-associated protein 3

    UniProtKB/TrEMBL
    A0A8C7FIX6, A0A8C7M3N8
    Related
    ENSOKIP00005028926.1, ENSOKIT00005030607.1
    Conserved Domains (1) summary
    pfam05600
    Location:5 → 502
    DUF773; Protein of unknown function (DUF773)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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