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Trip6 thyroid hormone receptor interactor 6 [ Castor canadensis (American beaver) ]

Gene ID: 109698108, updated on 14-Mar-2024

Summary

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Gene symbol
Trip6
Gene description
thyroid hormone receptor interactor 6
See related
Ensembl:ENSCCNG00000016158
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017872194.1 (89765..94339)

NW_017872194.1Genomic Context describing neighboring genes Neighboring gene EPH receptor B4 Neighboring gene solute carrier family 12 member 9 Neighboring gene serrate, RNA effector molecule Neighboring gene UFM1 specific peptidase 1 (inactive)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017872194.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of non-canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyroid receptor-interacting protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017872194.1 Reference C.can genome v1.0

    Range
    89765..94339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020182102.1 → XP_020037691.1  thyroid receptor-interacting protein 6

    UniProtKB/TrEMBL
    A0A250Y1M8
    Related
    ENSCCNP00000015779.1, ENSCCNT00000020603.1
    Conserved Domains (4) summary
    cd09350
    Location:283 → 336
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09357
    Location:403 → 465
    LIM3_Zyxin_like; The third LIM domain of Zyxin-like family
    cl02475
    Location:343 → 402
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26464
    Location:3 → 215
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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