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Sfrp4 secreted frizzled related protein 4 [ Castor canadensis (American beaver) ]

Gene ID: 109695414, updated on 14-Mar-2024

Summary

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Gene symbol
Sfrp4
Gene description
secreted frizzled related protein 4
See related
Ensembl:ENSCCNG00000001164
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Sfrp4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871651.1 (147144..158205)

NW_017871651.1Genomic Context describing neighboring genes Neighboring gene ependymin related 1 Neighboring gene NME/NM23 family member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871651.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871651.1 Reference C.can genome v1.0

    Range
    147144..158205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020177948.1 → XP_020033537.1  secreted frizzled-related protein 4

    UniProtKB/TrEMBL
    A0A8B7VPL4
    Related
    ENSCCNP00000001074.1, ENSCCNT00000001391.1
    Conserved Domains (2) summary
    cl02447
    Location:20 → 146
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
    cl02512
    Location:188 → 296
    NTR_like; NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the ...
Nucleotide Protein
Heading Accession and Version

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