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Col9a2 collagen type IX alpha 2 chain [ Castor canadensis (American beaver) ]

Gene ID: 109691585, updated on 14-Mar-2024

Summary

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Gene symbol
Col9a2
Gene description
collagen type IX alpha 2 chain
See related
Ensembl:ENSCCNG00000007961
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Col9a2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871125.1 (545870..560637, complement)

NW_017871125.1Genomic Context describing neighboring genes Neighboring gene protein RMD5 homolog B pseudogene Neighboring gene zinc metallopeptidase STE24 Neighboring gene small ArfGAP2 Neighboring gene zinc finger protein ZFP69B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871125.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-2(IX) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871125.1 Reference C.can genome v1.0

    Range
    545870..560637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020171689.1 → XP_020027278.1  collagen alpha-2(IX) chain

    UniProtKB/TrEMBL
    A0A8B7V6D2
    Related
    ENSCCNP00000007495.1, ENSCCNT00000009930.1
    Conserved Domains (1) summary
    pfam01391
    Location:443 → 502
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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