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Syp synaptophysin [ Castor canadensis (American beaver) ]

Gene ID: 109691529, updated on 14-Mar-2024

Summary

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Gene symbol
Syp
Gene description
synaptophysin
See related
Ensembl:ENSCCNG00000005951
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871118.1 (3592..16336)

NW_017871118.1Genomic Context describing neighboring genes Neighboring gene prickle planar cell polarity protein 3 Neighboring gene proteolipid protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871118.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in presynaptic active zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptophysin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871118.1 Reference C.can genome v1.0

    Range
    3592..16336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020171591.1 → XP_020027180.1  synaptophysin

    UniProtKB/TrEMBL
    A0A250XYB3, A0A8C0W7U4
    Related
    ENSCCNP00000005610.1, ENSCCNT00000007389.1
    Conserved Domains (1) summary
    pfam01284
    Location:22 → 221
    MARVEL; Membrane-associating domain
Nucleotide Protein
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Gene LinkOut

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