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Rgmb repulsive guidance molecule BMP co-receptor b [ Castor canadensis (American beaver) ]

Gene ID: 109691217, updated on 14-Mar-2024

Summary

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Gene symbol
Rgmb
Gene description
repulsive guidance molecule BMP co-receptor b
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871093.1 (94505..114465)

NW_017871093.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871093.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RGM domain family member B
Names
repulsive guidance molecule family member b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871093.1 Reference C.can genome v1.0

    Range
    94505..114465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020171065.1 → XP_020026654.1  RGM domain family member B

    UniProtKB/TrEMBL
    A0A250YH86, A0A8B7V6L7
    Conserved Domains (2) summary
    pfam06534
    Location:229 → 403
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:57 → 224
    RGM_N; Repulsive guidance molecule (RGM) N-terminus
Nucleotide Protein
Heading Accession and Version

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