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Tob2 transducer of ERBB2, 2 [ Castor canadensis (American beaver) ]

Gene ID: 109689353, updated on 14-Mar-2024

Summary

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Gene symbol
Tob2
Gene description
transducer of ERBB2, 2
See related
Ensembl:ENSCCNG00000028895
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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See Tob2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870861.1 (134072..142279)

NW_017870861.1Genomic Context describing neighboring genes Neighboring gene aconitase 2 Neighboring gene PHD finger protein 5A Neighboring gene TEF transcription factor, PAR bZIP family member Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene zinc finger CCCH-type containing 7B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870861.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Tob2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870861.1 Reference C.can genome v1.0

    Range
    134072..142279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020168173.1 → XP_020023762.1  protein Tob2

    UniProtKB/TrEMBL
    A0A250YFZ4
    Related
    ENSCCNP00000030170.1, ENSCCNT00000038036.1
    Conserved Domains (2) summary
    pfam07145
    Location:249 → 265
    PAM2; Ataxin-2 C-terminal region
    pfam07742
    Location:1 → 112
    BTG; BTG family
Nucleotide Protein
Heading Accession and Version

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