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Dennd1a DENN domain containing 1A [ Castor canadensis (American beaver) ]

Gene ID: 109688247, updated on 14-Mar-2024

Summary

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Gene symbol
Dennd1a
Gene description
DENN domain containing 1A
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870705.1 (921178..983617, complement)

NW_017870705.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109688254 Neighboring gene uncharacterized LOC109688256

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870705.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in clathrin-coated vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: DENN domain-containing protein 1A
Names
DENN domain-containing protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870705.1 Reference C.can genome v1.0

    Range
    921178..983617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020166565.1 → XP_020022154.1  LOW QUALITY PROTEIN: DENN domain-containing protein 1A

    UniProtKB/TrEMBL
    A0A250Y6L1, A0A8B7UTB9
    Conserved Domains (4) summary
    smart00801
    Location:273 → 339
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:63 → 241
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:26 → 59
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    cl26464
    Location:612 → 890
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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