U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ptprz1 protein tyrosine phosphatase receptor type Z1 [ Castor canadensis (American beaver) ]

Gene ID: 109685528, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Ptprz1
Gene description
protein tyrosine phosphatase receptor type Z1
See related
Ensembl:ENSCCNG00000016835
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870389.1 (1070112..1192459, complement)

NW_017870389.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily D member 2 Neighboring gene ubiquitin-conjugating enzyme E2 C-like Neighboring gene aminoadipate-semialdehyde synthase Neighboring gene high mobility group protein B2 pseudogene Neighboring gene FAM3 metabolism regulating signaling molecule C

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_017870389.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
receptor-type tyrosine-protein phosphatase zeta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870389.1 Reference C.can genome v1.0

    Range
    1070112..1192459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020162411.1 → XP_020018000.1  receptor-type tyrosine-protein phosphatase zeta

    UniProtKB/TrEMBL
    A0A8B7UIV9, A0A8C0WX98
    Related
    ENSCCNP00000016616.1, ENSCCNT00000021646.1
    Conserved Domains (4) summary
    smart00194
    Location:1712 → 1987
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:2046 → 2276
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd03122
    Location:33 → 286
    alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
    pfam00041
    Location:301 → 389
    fn3; Fibronectin type III domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.